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CLUSTERING

 
Category: User Defined Function.
 
Description: Perform a clusering analysis on the selected similarity or distance matrix.
 
It will open a phenetic tree or 3 dimensional graph depending on the clustering method used.
 
Syntax: CLUSTERING(Range of the square matrix, Range containing labels of objects, Clustering method, [Section of matrix to use], [Title of analysis])
 
The CLUSTERING function syntax has the following arguments:
 
Range of the square matrix: Required. Selected the range of the similarity/distance matrix.
 
Range containing labels of objects.
 
Clustering method. Possible parameters are:
  •  UPGMA for Unweighted Pair Group Method with Arithmetic Mean.
  •  WPGMA for Weighted Pair Group Method with Arithmetic Mean
  •  UPGMC for Centroid Unweighted Pair Group Method.
  •  WPGMC for Centroid Weighted Pair Group Method.
  •  NJ for Neighbor Joining.
  •  LANCE for Lance & Williams flexible clustering.
  •  COMPLETE for Complete linkage.
  •  SINGLE for Single linkage.
  •  MDS for Multiple Dimensional Scaling.
 
Section of matrix to use: Optional. Possible parameters:
  •  BOTH, (default value) will calculate the average between the upper and lower sections of the matrix.
  •  UPPER, only the upper section will be used (above the diagonal).
  •  LOWER, only the lower section will be used (below the diagonal).
 
Title of analysis: Optional.